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Global improvements of a  protein alignment algorithm  and comparison with a global optimization solver
Paulo Gouveia, Roberto Andreani, Ana Friedlander, J.M. Martínez, Leandro Martínez

The LovoAlign method for Protein Alignment, based on the Low-Order Value Optimization theory, is recalled. The method is modified in order to improve global convergence properties and compared against other global minimization procedures.

Keywords: Protein alignment, global optimization, structal score

Cite this paper:
Gouveia P., Andreani R., Friedlander A., Martínez J.M., Martínez L., Global improvements of
a protein alignment algorithm and comparison with a global optimization solver.
Bull. Comput. Appl. Math. (Bull CompAMa),
Vol. 1, No. 1, Jan-Jun, pp.11-24, 2013